MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,592
rRNA: 3
tRNA: 48
tmRNA: 1
Total number of protein coding genes annotated/found:
2,426
Display
20
50
100
All items per page
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 122 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5039|JADGLG010000010.1
MBF0803529.1
Genome Viewer
NA
AA
1296/432
44192-45487
adenosylmethionine--8-amino-7-oxononanoate transaminase
SEQF5039|JADGLG010000030.1
MBF0804224.1
Genome Viewer
NA
AA
1008/336
13223-12216
biotin synthase BioB
SEQF5039|JADGLG010000006.1
MBF0803282.1
Genome Viewer
NA
AA
696/232
64188-64883
dethiobiotin synthase
SEQF5039|JADGLG010000004.1
MBF0803129.1
Genome Viewer
NA
AA
864/288
45529-46392
pimeloyl-ACP methyl ester esterase BioH
SEQF5039|JADGLG010000058.1
MBF0804758.1
Genome Viewer
NA
AA
1134/378
9942-8809
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
SEQF5039|JADGLG010000058.1
MBF0804755.1
Genome Viewer
NA
AA
3213/1071
7294-4082
carbamoyl-phosphate synthase large subunit
SEQF5039|JADGLG010000112.1
MBF0805060.1
Genome Viewer
NA
AA
909/303
32-940
type II CRISPR-associated endonuclease Cas1
SEQF5039|JADGLG010000032.1
MBF0804291.1
Genome Viewer
NA
AA
2733/911
24742-22010
type III-A CRISPR-associated protein Cas10/Csm1
SEQF5039|JADGLG010000112.1
MBF0805061.1
Genome Viewer
NA
AA
327/109
933-1259
CRISPR-associated endonuclease Cas2
SEQF5039|JADGLG010000041.1
MBF0804500.1
Genome Viewer
NA
AA
3204/1068
20540-23743
type II CRISPR RNA-guided endonuclease Cas9
SEQF5039|JADGLG010000097.1
MBF0805028.1
Genome Viewer
NA
AA
1425/475
1241-2665
cytochrome c oxidase accessory protein CcoG
SEQF5039|JADGLG010000005.1
MBF0803206.1
Genome Viewer
NA
AA
1437/479
54857-56293
cytochrome-c oxidase%2C cbb3-type subunit I
SEQF5039|JADGLG010000005.1
MBF0803207.1
Genome Viewer
NA
AA
612/204
56320-56931
cytochrome-c oxidase%2C cbb3-type subunit II
SEQF5039|JADGLG010000005.1
MBF0803209.1
Genome Viewer
NA
AA
1395/465
57134-58528
cytochrome-c oxidase%2C cbb3-type subunit III
SEQF5039|JADGLG010000010.1
MBF0803536.1
Genome Viewer
NA
AA
195/65
53097-52903
cbb3-type cytochrome oxidase assembly protein CcoS
SEQF5039|JADGLG010000012.1
MBF0803621.1
Genome Viewer
NA
AA
807/269
33448-32642
cytochrome c biogenesis protein CcsA
SEQF5039|JADGLG010000023.1
MBF0804044.1
Genome Viewer
NA
AA
1197/399
28020-26824
c-type cytochrome biogenesis protein CcsB
SEQF5039|JADGLG010000076.1
MBF0804926.1
Genome Viewer
NA
AA
1401/467
640-2040
citrate lyase holo-[acyl-carrier protein] synthase
SEQF5039|JADGLG010000018.1
MBF0803855.1
Genome Viewer
NA
AA
2286/762
29023-31308
ATP-dependent Clp protease ATP-binding subunit ClpA
SEQF5039|JADGLG010000003.1
MBF0803078.1
Genome Viewer
NA
AA
2571/857
93687-91117
ATP-dependent chaperone ClpB
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 122 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
